Family GP000018


Family ID GP000018  add to my list RDF
Family name Haem peroxidase superfamily   suggest a name
Synonym(s) Plant peroxidase
Family Ontology
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molecular_function
peroxidase activity
GO:0004601 (60%) - peroxidase activity
Curation status ?
Found in Embryophyta
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Haem peroxidase superfamily (plant-specificity: 19%)
GP000018 (4016)
2
Class III peroxidase family
GP015072 (4005) , GP036104 (3)
3 GP039799 (4001) , GP065065 (3)
4 GP069323 (3007) , GP069430 (975) ,
(plant-specificity: 85%)
GP137725 (6) ,
(plant-specificity: 100%)
GP137971 (6) , GP143900 (3) , GP099392 (3) , GP092928 (3)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 4016
Species Count (w/o splice) Count (w/ splice)
66 77
95 95
280 280
102 102
111 111
103 103
92 92
72 72
155 172
142 142
136 136
166 166
142 197
145 147
75 75
117 117
108 108
77 77
74 79
58 58
87 87
99 126
80 80
118 132
76 76
106 106
70 80
173 173
120 120
147 159
75 75
92 95
187 197
104 104


Information to display




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Close InterPro family
IPR Annotation Type % Occurence Specificity
Plant peroxidase
IPR000823
Plant peroxidase Family 92 (3675) No
Haem peroxidase
IPR010255
Haem peroxidase Family 95 (3815) No

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Haem peroxidase, plant/fungal/bacterial
IPR002016
Haem peroxidase, plant/fungal/bacterial Domain 95 (3805) No
Peroxidases heam-ligand binding site
IPR019793
Peroxidases heam-ligand binding site Binding_site 71 (2849) No
Peroxidase, active site
IPR019794
Peroxidase, active site Active_site 60 (2418) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR019793 IPR010255 IPR002016 IPR000823 IPR019794


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Species
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