Family GP003767


Family ID GP003767  add to my list RDF
Family name (2r)-phospho-3-sulfolactate synthase, coma family   suggest a name
Cross-reference(s) PMID:
Identification of coenzyme M biosynthetic phosphosulfolactate synthase: a new family of sulfonate-biosynthesizing enzymes.
11830598
Curation status ?
Found in Embryophyta
Phylogenetic analyzes Phylogeny done




Clustering level Family ID (number of sequences)
1
(2r)-phospho-3-sulfolactate synthase, coma family
GP003767 (68)
2 GP020630 (68)
3 GP045639 (68)
4 GP075293 (68)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
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    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 68
Species Count (w/o splice) Count (w/ splice)
2 9
1 1
2 2
1 1
1 1
1 1
2 2
1 1
1 4
1 1
1 1
1 1
1 3
1 2
1 1
1 1
1 1
3 3
1 1
1 1
8 8
1 3
1 1
2 4
1 1
1 1
1 1
3 3
2 2
1 1
1 1
1 1
2 2
1 1


Information to display




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Close InterPro family
IPR Annotation Type % Occurence Specificity
(2R)-phospho-3-sulpholactate synthase, ComA
IPR003830
(2R)-phospho-3-sulpholactate synthase, ComA Family 93 (63) No

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Aldolase-type TIM barrel
IPR013785
Aldolase-type TIM barrel Domain 93 (63) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR013785 IPR003830


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Species
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[Masking step 1 details] [Masking step 2 details] [Filtration details] [Global HMM file]

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Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
68 51 (75%) 44 (65%) [41; 282; 364] ~253 604 280




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