Family GP040207


Family ID GP040207  add to my list RDF
Family name Unannotated cluster   suggest a name
Curation status ?
Found in Tracheophyta
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
PR-10 family (plant-specificity: 90%)
GP000520 (561)
2 GP015480 (442)
3 GP040207 (421)
4 GP069679 (421)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 421
Species Count (w/o splice) Count (w/ splice)
8 8
17 17
3 3
5 5
6 6
12 12
6 6
1 1
4 4
4 4
3 3
3 4
5 6
19 19
9 9
8 8
16 16
2 2
16 16
34 35
14 14
22 22
26 26
13 13
2 3
57 57
15 15
15 18
10 10
17 17
22 26
16 16


Information to display




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Close InterPro family
IPR Annotation Type % Occurence Specificity
Bet v I type allergen
IPR024949
Bet v I type allergen Family 95 (402) No

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Bet v I domain
IPR000916
Bet v I domain Domain 97 (410) No
START-like domain
IPR023393
START-like domain Domain 99 (415) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR023393 IPR000916 IPR024949


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Species
Information to display
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