Family GP000082


Family ID GP000082  add to my list RDF
Family name Ankyrin repeat superfamily   suggest a name
Cross-reference(s) PMID:
Hundreds of ankyrin-like repeats in functionally diverse proteins: mobile modules that cross phyla horizontally?
8108379
Family Ontology
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N/A
Curation status ?
Found in No specificity
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Ankyrin repeat superfamily (plant-specificity: 19%)
GP000082 (3276)
2 GP015223 (1710) ,
Ankyrin repeat group4
GP016924 (308) ,
Ankyrin repeat and SOCS box protein 3 group
GP015917 (215) ,
Ankyrin repeat group 3
GP016459 (170) , GP017116 (145) ,
Ankyrin repeat group10
GP017447 (117) , GP017960 (95) , GP017081 (152) , GP018787 (91) , GP018600 (72) , GP022001 (48) , GP022414 (45) ,
(plant-specificity: 30%)
GP022335 (44) ,
(plant-specificity: 60%)
GP022142 (38) , GP112012 (9) ,
(plant-specificity: 87%)
GP113038 (5) , GP024825 (4) ,
(plant-specificity: 100%)
GP114439 (5) , GP115295 (4) , GP032556 (3) , GP115971 (3) , GP116122 (3) , GP116134 (3) , GP116142 (3) , GP116278 (2) , GP116333 (3) , GP032592 (3)
3 GP040166 (1182) , GP041116 (295) , GP041563 (247) , GP040637 (213) , GP041085 (170) , GP041679 (145) , GP042502 (152) , GP042153 (109) , GP042779 (94) , GP043551 (91) , GP042647 (73) , GP043342 (72) , GP042130 (77) , GP045871 (66) , GP046898 (55) , GP047160 (48) , GP047629 (45) ,
(plant-specificity: 30%)
GP047538 (44) ,
(plant-specificity: 60%)
GP047314 (36) , GP060767 (9) , GP122772 (7) ,
(plant-specificity: 87%)
GP124267 (5) ,
(plant-specificity: 100%)
GP124711 (5) ,
(plant-specificity: 40%)
GP124718 (5) , GP051195 (4) , GP125852 (4) , GP125954 (4) ,
(plant-specificity: 33%)
GP126183 (6) , GP126375 (3) , GP127469 (4) , GP060677 (3) , GP128245 (3) , GP128501 (3) , GP128762 (3) , GP129114 (2) , GP129508 (3) , GP060764 (3)
4 GP069771 (535) , GP071310 (231) , GP070076 (213) , GP071118 (211) , GP070988 (183) , GP074481 (178) , GP070478 (170) , GP071213 (145) , GP074266 (124) , GP071975 (101) , GP075619 (95) , GP072259 (94) , GP073070 (91) , GP071836 (75) , GP072882 (73) , GP073077 (72) , GP075513 (66) , GP073638 (61) , GP080248 (59) , GP076684 (55) ,
(plant-specificity: 11%)
GP082025 (51) , GP076996 (48) , GP077495 (45) ,
(plant-specificity: 19%)
GP077399 (41) ,
(plant-specificity: 50%)
GP077554 (31) , GP078394 (28) , GP132982 (23) ,
(plant-specificity: 33%)
GP133277 (19) , GP078034 (13) ,
(plant-specificity: 22%)
GP134658 (11) , GP135472 (9) , GP094024 (9) ,
(plant-specificity: 12%)
GP135641 (9) ,
(plant-specificity: 74%)
GP136806 (7) , GP136911 (7) , GP137832 (6) ,
(plant-specificity: 33%)
GP097730 (6) ,
(plant-specificity: 87%)
GP138895 (5) ,
(plant-specificity: 86%)
GP083955 (5) ,
(plant-specificity: 100%)
GP139644 (5) ,
(plant-specificity: 40%)
GP139651 (5) , GP081887 (4) , GP141094 (4) , GP143271 (4) , GP088560 (3) , GP093834 (3) , GP093841 (3) , GP144446 (3) , GP144700 (3) , GP144723 (3) , GP144814 (3) , GP145024 (3) , GP145245 (3) , GP084489 (3) , GP145773 (3) , GP146351 (3) , GP094020 (3) , GP147401 (3)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 3276
Species Count (w/o splice) Count (w/ splice)
10 10
102 102
97 97
35 45
31 31
72 72
54 54
57 57
60 60
116 116
57 57
143 182
76 86
55 55
92 92
67 107
100 102
74 74
66 66
58 58
98 98
58 83
50 50
160 160
155 245
125 125
120 182
68 68
96 96
37 61
138 138
51 51
84 86
39 39
64 70
108 140
61 61


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Ankyrin repeat
IPR002110
Ankyrin repeat Repeat 82 (2676) No
Ankyrin repeat-containing domain
IPR020683
Ankyrin repeat-containing domain Domain 85 (2789) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR002110 IPR020683


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Species
Information to display
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