Family GP040568


Family ID GP040568  add to my list RDF
Family name Unannotated cluster   suggest a name
Family Ontology
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molecular_function
ammonium transmembrane transporter activity
GO:0008519 (92%) - ammonium transmembrane transporter activity
biological_process
ammonium transport
GO:0015696 (92%) - ammonium transport
ammonium transmembrane transport
GO:0072488 (60%) - ammonium transmembrane transport
Curation status ?
Found in Viridiplantae
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Ammonium transporter subfamily (plant-specificity: 19%)
GP000388 (601)
2
Ammonium transporter subfamily
GP015919 (286)
3 GP040568 (286)
4 GP070010 (286)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 286
Species Count (w/o splice) Count (w/ splice)
22 22
11 11
3 3
10 10
5 5
9 9
8 8
9 9
9 9
10 10
6 6
3 3
7 7
6 9
7 7
7 7
5 5
6 6
8 8
1 2
4 4
8 8
8 10
6 6
18 22
6 6
9 9
3 3
11 11
8 8
8 9
5 5
7 7
11 13
9 9


Information to display




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Close InterPro family
IPR Annotation Type % Occurence Specificity
Blood group Rhesus C/E/D polypeptide
IPR002229
Blood group Rhesus C/E/D polypeptide Family 46 (132) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Ammonium transporter AmtB-like domain
IPR024041
Ammonium transporter AmtB-like domain Domain 92 (262) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR024041 IPR002229
Ammonium transporter, conserved site
IPR018047
Ammonium transporter
IPR001905



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Species
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