Family GP040750


Family ID GP040750  add to my list RDF
Family name Unannotated cluster   suggest a name
Curation status ?
Found in Embryophyta
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
LURP-one-related (LOR) family (plant-specificity: 99%)
GP000174 (735)
2 GP016046 (274)
3 GP040750 (236)
4 GP070345 (229) , GP086154 (4) , GP144260 (3)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 236
Species Count (w/o splice) Count (w/ splice)
6 8
7 7
11 11
1 1
5 5
5 5
6 6
4 4
4 4
4 4
2 2
10 10
4 4
9 10
1 1
5 5
7 7
2 2
7 9
3 3
12 12
10 12
8 8
14 21
4 4
7 7
1 1
6 6
3 3
12 12
2 2
12 14
15 18
8 8


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
LURP1-like domain
IPR007612
LURP1-like domain Domain 97 (230) No
Tubby C-terminal-like domain
IPR025659
Tubby C-terminal-like domain Domain 99 (234) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR025659 IPR007612


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Species
Information to display
?


(click on the button above to get your protein list)