Family GP043033


Family ID GP043033  add to my list RDF
Family name Unannotated cluster   suggest a name
Family Ontology
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molecular_function
protein binding
GO:0005515 (1%) - protein binding
heat shock protein binding
GO:0031072 (1%) - heat shock protein binding
Curation status ?
Found in Embryophyta
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Signal transduction superfamily (plant-specificity: 60%)
GP000129 (2217)
2 GP016692 (198)
3 GP043033 (198)
4 GP073045 (116) , GP072719 (82)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 198
Species Count (w/o splice) Count (w/ splice)
2 2
3 3
5 5
2 2
7 7
6 6
4 4
4 4
3 4
2 4
3 3
2 2
2 5
2 2
2 2
4 4
5 5
2 2
3 9
2 2
11 11
6 15
2 2
5 36
2 2
6 6
3 7
4 4
4 4
5 6
5 5
6 7
8 12
4 4


Information to display




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Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
SANT/Myb domain
IPR001005
SANT/Myb domain Domain 85 (169) No
Myb domain, plants
IPR006447
Myb domain, plants Domain 88 (175) No
Homeodomain-like
IPR009057
Homeodomain-like Domain 89 (176) No
Myb domain
IPR017930
Myb domain Domain 85 (168) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR009057 IPR001005 IPR006447 IPR017930


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Species
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