Family GP041997


Family ID GP041997  add to my list RDF
Family name Unannotated cluster   suggest a name
Family Ontology
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molecular_function
protein binding
GO:0005515 (1%) - protein binding
Curation status ?
Found in Tracheophyta
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
MYB family transcription factor Group3 SHAQKYF (plant-specificity: 30%)
GP000128 (1885)
2
(plant-specificity: 90%)
GP108930 (128)
3 GP041997 (128)
4 GP072525 (126)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 128
Species Count (w/o splice) Count (w/ splice)
2 2
1 1
1 1
4 4
3 3
5 5
2 2
1 4
1 1
1 1
1 1
3 4
1 1
1 1
1 1
1 1
2 7
2 2
9 9
3 14
2 2
2 18
1 1
4 4
1 3
6 6
2 2
2 2
1 1
4 6
4 15
3 3


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
Myb domain, plants
IPR006447
Myb domain
IPR017930



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Species
Information to display
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