Family GP003584
Family ID | GP003584 add to my list RDF |
---|---|
Family name | Folate-sensitive fragile site protein Fra10Ac1 homologs family suggest a name |
Curation status ? |
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Found in | Viridiplantae |
Phylogenetic analyzes |
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Clustering level | Family ID (number of sequences) |
---|---|
1 |
Folate-sensitive fragile site protein Fra10Ac1 homologs family
GP003584
(60)
|
2 | GP020261 (60) |
3 | GP045235 (60) |
4 |
GP074856
(52)
,
(plant-specificity: 12%)
GP136108
(8)
|
Table 1:
This table displays which relationship has the selected family with other
families in GreenPhyl clustering
?.
Legend:
-
Families (clustering)
- Sequences are clustered and classified at 4 levels (from less to more stringent).
- The number between parenthesis indicates the number of sequences in the cluster.
- Selected family is highlighted like this.
- Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
- Gene families are coloured in this color when the phylogenetic analyses are available.
(click on chart bars above to get species proteins)

IPR | Annotation | Type | % | Occurence | Specificity |
---|---|---|---|---|---|
Folate-sensitive fragile site protein Fra10Ac1
IPR019129
|
Folate-sensitive fragile site protein Fra10Ac1 | Family | 78 | (47) | Yes |

No other significant IPR (i.e. > 25%)


(click on the button above to get your protein list)
Alignment not available.
[Masking step 1 details]
[Masking step 2 details]
[Filtration details]
[Global HMM file]
Phylogeny tree not available.
Alignment and filtration statistics:
Overall family sequences | Sequences used for alignment (w/o splice) | Sequences kept after filtration | [min; median; max] ~average sequence length | Alignment length | Masked alignment length |
---|---|---|---|---|---|
60 | 47 (78%) | 38 (63%) | [60; 230; 351] ~206 | 635 | 212 |