Family GP000066


Family ID GP000066  add to my list RDF
Family name General substrate transporter superfamily   suggest a name
Synonym(s) Sugar transporter
Cross-reference(s) PMID:
Major facilitator superfamily.
9529885
Family Ontology
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- 0  
molecular_function
transmembrane transporter activity
GO:0022857 (88%) - transmembrane transporter activity
Curation status ?
Found in No specificity
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
General substrate transporter superfamily (plant-specificity: 9%)
GP000066 (3477)
2 GP015294 (1685) ,
Sugar/inositol transporter family
GP015144 (1004) , GP016093 (361) ,
Organic cation transport family
GP016361 (217) ,
Sugar transporteur family
GP016522 (197) ,
(plant-specificity: 100%)
GP112565 (6) , GP114124 (4) , GP115851 (3)
3
Hexose transporter subfamily
GP039851 (987) , GP040052 (565) , GP040090 (490) , GP040671 (324) , GP040796 (304) ,
Sugar transporter MSSP subfamily
GP040740 (361) , GP042574 (215) , GP041140 (197) ,
(plant-specificity: 100%)
GP048884 (17) ,
(plant-specificity: 100%)
GP123610 (6) ,
(plant-specificity: 100%)
GP124368 (5) , GP128308 (3)
4 GP069372 (987) , GP069545 (565) , GP069582 (490) , GP070167 (361) , GP070908 (323) , GP070215 (304) , GP070535 (196) , GP071543 (126) , GP073054 (89) ,
(plant-specificity: 100%)
GP079032 (14) ,
(plant-specificity: 100%)
GP138059 (6) , GP144538 (3) , GP145393 (3) , GP145538 (3)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 3477
Species Count (w/o splice) Count (w/ splice)
2 2
9 9
58 58
29 42
42 42
145 145
59 59
 $ 78 78
69 69
75 75
67 67
88 120
70 77
77 77
109 109
92 165
88 95
69 69
78 78
72 72
57 57
63 96
68 69
156 156
90 244
65 65
104 174
76 76
93 93
56 78
187 187
107 107
115 117
87 87
86 95
141 181
87 87


Information to display




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Close InterPro family
IPR Annotation Type % Occurence Specificity
Sugar/inositol transporter
IPR003663
Sugar/inositol transporter Family 66 (2284) No
General substrate transporter
IPR005828
General substrate transporter Family 88 (3044) No
Benzoyl-CoA oxygenase/reductase, BoxA protein
IPR017634
Benzoyl-CoA oxygenase/reductase, BoxA protein Family 1 (1) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Sugar transporter, conserved site
IPR005829
Sugar transporter, conserved site Conserved_site 68 (2372) No
Major facilitator superfamily domain, general substrate transporter
IPR016196
Major facilitator superfamily domain, general substrate transporter Domain 87 (3017) No
Major facilitator superfamily domain
IPR020846
Major facilitator superfamily domain Domain 82 (2851) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR016196 IPR020846 IPR005828 IPR005829 IPR003663


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Species
Information to display
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