Family GP043354


Family ID GP043354  add to my list RDF
Family name CCAAT-DR1 transcription factor family   suggest a name
Comment DAFT and DRTF description
Curation status ?
Found in No specificity
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
(plant-specificity: 19%)
GP104214 (768)
2 GP015318 (765)
3
CCAAT-DR1 transcription factor family
GP043354 (104)
4 GP072861 (104)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 104
Species Count (w/o splice) Count (w/ splice)
1 1
1 1
8 8
2 2
1 1
5 5
1 1
3 3
2 2
3 3
2 2
1 2
1 1
1 1
1 1
2 5
1 1
1 1
3 3
3 3
1 1
2 6
1 1
5 5
2 6
2 2
2 7
1 1
3 3
1 1
2 2
5 5
3 3
2 2
2 3
5 7
2 2


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Transcription factor CBF/NF-Y/archaeal histone
IPR003958
Transcription factor CBF/NF-Y/archaeal histone Domain 89 (93) No
Histone-fold
IPR009072
Histone-fold Domain 93 (97) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR009072 IPR003958


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Species
Information to display
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