Family GP045977


Family ID GP045977  add to my list RDF
Family name Unannotated cluster   suggest a name
Curation status ?
Found in Spermatophyta plant-specific
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
PR-10 family (plant-specificity: 90%)
GP000520 (561)
2
(plant-specificity: 100%)
GP020942 (107)
3
(plant-specificity: 100%)
GP045977 (86)
4
(plant-specificity: 100%)
GP075627 (75) ,
(plant-specificity: 100%)
GP134716 (11)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 86
Species Count (w/o splice) Count (w/ splice)
1 1
2 2
1 1
1 1
1 1
1 1
2 2
2 2
2 2
7 7
2 2
5 5
4 4
5 5
3 3
2 2
1 1
3 3
9 19
6 6
1 3
2 2
1 1
3 3
1 1
2 2
1 1
1 1
1 1
1 1


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Bet v I domain
IPR000916
Bet v I domain Domain 90 (77) No
START-like domain
IPR023393
START-like domain Domain 99 (85) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR023393 IPR000916


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Species
Information to display
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