Family GP044101


Family ID GP044101  add to my list RDF
Family name Unannotated cluster   suggest a name
Family Ontology
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molecular_function
malate dehydrogenase activity
GO:0016615 (74%) - malate dehydrogenase activity
malate dehydrogenase (NADP+) activity
GO:0046554 (67%) - malate dehydrogenase (NADP+) activity
Curation status ?
Found in Viridiplantae
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Lactate/malate dehydrogenase family (plant-specificity: 9%)
GP000624 (685)
2
Malate dehydrogenase, NAD/NADP subfamily
GP016151 (243)
3
(plant-specificity: 9%)
GP044101 (89)
4 GP073628 (89)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 89
Species Count (w/o splice) Count (w/ splice)
1 1
17 17
4 5
1 1
2 2
1 1
3 3
2 2
1 1
1 1
1 1
1 1
1 1
2 2
1 1
2 3
1 1
1 1
2 2
1 1
1 3
1 1
5 5
1 2
1 1
2 8
1 1
2 2
1 1
5 5
1 1
2 3
1 1
2 2
2 4
1 1


Information to display




(click on chart bars above to get species proteins)


Close InterPro family
IPR Annotation Type % Occurence Specificity
Malate dehydrogenase, NADP-dependent, plants
IPR011273
Malate dehydrogenase, NADP-dependent, plants Family 67 (60) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Lactate/malate dehydrogenase, N-terminal
IPR001236
Lactate/malate dehydrogenase, N-terminal Domain 85 (76) No
Malate dehydrogenase, active site
IPR001252
Malate dehydrogenase, active site Active_site 83 (74) No
Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
IPR015955
Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal Domain 89 (79) No
Lactate/malate dehydrogenase, C-terminal
IPR022383
Lactate/malate dehydrogenase, C-terminal Domain 88 (78) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR015955
Malate dehydrogenase, type 2
IPR010945 IPR011273 IPR001252 IPR001236 IPR022383



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Species
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