Family GP047598


Family ID GP047598  add to my list RDF
Family name Unannotated cluster   suggest a name
Curation status ?
Found in Viridiplantae
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Brca1-associated 2 family
GP002183 (152)
2
(plant-specificity: 58%)
GP022382 (45)
3
(plant-specificity: 58%)
GP047598 (45)
4
(plant-specificity: 46%)
GP077471 (43)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 45
Species Count (w/o splice) Count (w/ splice)
2 2
1 1
1 1
4 4
1 1
1 1
1 1
1 1
1 1
1 1
2 4
1 1
1 1
1 1
1 1
2 2
1 1
1 1
2 2
1 3
1 1
1 1
1 1
1 1
3 3
1 1
1 1
1 1
1 2
2 2


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Zinc finger, UBP-type
IPR001607
Zinc finger, UBP-type Domain 84 (38) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR001607


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Species
Information to display
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(click on the button above to get your protein list)