Family GP049376


Family ID GP049376  add to my list RDF
Family name Unannotated cluster   suggest a name
Curation status ?
Found in No specificity
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Signal transduction superfamily (plant-specificity: 60%)
GP000129 (2217)
2 GP023840 (32)
3 GP049376 (32)
4 GP094110 (15) , GP086982 (11) , GP141936 (4)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 32
Species Count (w/o splice) Count (w/ splice)
2 2
11 11
1 1
1 1
11 11
1 1
1 1
2 2
2 2


Information to display




(click on chart bars above to get species proteins)


Close InterPro family
IPR Annotation Type % Occurence Specificity
Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB
IPR011879
Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB Family 6 (2) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Signal transduction response regulator, receiver domain
IPR001789
Signal transduction response regulator, receiver domain Domain 81 (26) No
CheY-like superfamily
IPR011006
CheY-like superfamily Domain 81 (26) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
Winged helix-turn-helix DNA-binding domain
IPR011991 IPR011006 IPR001789
Signal transduction response regulator, C-terminal
IPR001867



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Species
Information to display
?


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