Family GP120247

Family ID GP120247  add to my list RDF
Family name Unannotated cluster   suggest a name
Curation status ?
Found in Magnoliophyta
Phylogenetic analyzes Not available

Clustering level Family ID (number of sequences)
MADS transcription factor family (plant-specificity: 60%)
GP000028 (4022)
(plant-specificity: 92%)
GP109173 (66) ,
(plant-specificity: 97%)
GP025797 (33)
(plant-specificity: 85%)
GP120247 (15)
(plant-specificity: 63%)
GP082827 (40)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.

  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.

Sequence total: 15
Species Count (w/o splice) Count (w/ splice)
1 1
1 1
5 5
2 2
1 1
3 3
2 2

Information to display

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Close InterPro family

No IPR family

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Transcription factor, MADS-box
Transcription factor, MADS-box Domain 87 (13) No

Close Domain architecture

Close Representative InterPro domains - Consensus schema

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Information to display

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