Family GP122945

Family ID GP122945  add to my list RDF
Family name Unannotated cluster   suggest a name
Curation status ?
Found in Solanum plant-specific
Phylogenetic analyzes Not available

Clustering level Family ID (number of sequences)
MADS transcription factor family (plant-specificity: 60%)
GP000028 (4022)
Mgamma-I subfamily
GP015494 (458)
(plant-specificity: 100%)
GP122945 (7)
(plant-specificity: 100%)
GP139709 (5)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.

  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.

Sequence total: 7
Species Count (w/o splice) Count (w/ splice)
6 6
1 1

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No IPR family

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IPR Annotation Type % Occurence Specificity
Transcription factor, MADS-box
Transcription factor, MADS-box Domain 100 (7) No

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Information to display

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