Family GP000046
Family ID | GP000046 add to my list RDF |
---|---|
Family name | GRAS transcription factor family suggest a name |
Cross-reference(s) |
PMID:
The GRAS gene family in Arabidopsis: sequence characterization and basic expression analysis of the SCARECROW-LIKE genes.
10341448
|
Family Ontology |
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N/A
|
Curation status ? |
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Found in | Embryophyta |
Phylogenetic analyzes | ![]() |
Clustering level | Family ID (number of sequences) |
---|---|
1 |
GRAS transcription factor family
GP000046
(2277)
|
2 |
GP015177
(2031)
,
GP016567
(170)
,
(plant-specificity: 73%)
GP021150
(50)
,
GP113163
(3)
,
(plant-specificity: 100%)
GP113281
(5)
,
GP116191
(3)
,
GP116198
(3)
,
GP036497
(3)
|
3 |
GP040096
(1565)
,
GP040046
(414)
,
GP041199
(170)
,
(plant-specificity: 73%)
GP046204
(50)
,
(plant-specificity: 85%)
GP045591
(50)
,
(plant-specificity: 100%)
GP124658
(5)
,
GP126045
(3)
,
GP126240
(3)
,
GP126401
(2)
,
GP128881
(3)
,
GP065481
(3)
|
4 |
PAT1 subfamily
GP069799
(975)
,
LAS/SCR/SHR subfamily
GP069536
(414)
,
GP070111
(176)
,
GP070684
(170)
,
GP071313
(121)
,
DELLA subfamily
GP072067
(94)
,
GP072304
(94)
,
GP071980
(88)
,
GP075017
(43)
,
(plant-specificity: 73%)
GP075886
(42)
,
GP135636
(9)
,
(plant-specificity: 87%)
GP099349
(7)
,
(plant-specificity: 76%)
GP139271
(5)
,
(plant-specificity: 100%)
GP139566
(5)
,
GP144108
(3)
,
GP145009
(3)
,
GP096889
(3)
,
GP099854
(3)
,
GP149026
(3)
|
Table 1:
This table displays which relationship has the selected family with other
families in GreenPhyl clustering
?.
Legend:
-
Families (clustering)
- Sequences are clustered and classified at 4 levels (from less to more stringent).
- The number between parenthesis indicates the number of sequences in the cluster.
- Selected family is highlighted like this.
- Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
- Gene families are coloured in this color when the phylogenetic analyses are available.
(click on chart bars above to get species proteins)

No IPR family

IPR | Annotation | Type | % | Occurence | Specificity |
---|---|---|---|---|---|
Transcription factor GRAS
IPR005202
|
Transcription factor GRAS | Domain | 91 | (2072) | No |


(click on the button above to get your protein list)