Family GP069623


Family ID GP069623  add to my list RDF
Family name Unannotated cluster   suggest a name
Family Ontology
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molecular_function
protein binding
GO:0005515 (2%) - protein binding
Curation status ?
Found in Viridiplantae
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Signal transduction superfamily (plant-specificity: 60%)
GP000129 (2217)
2 GP015479 (415)
3 GP040144 (415)
4 GP069623 (415)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 415
Species Count (w/o splice) Count (w/ splice)
1 1
2 2
8 8
2 2
16 16
6 6
19 19
14 14
12 12
9 9
13 15
11 16
7 7
18 18
14 24
15 16
4 4
8 8
7 7
11 11
11 12
8 8
9 9
11 16
6 6
10 19
12 12
13 13
8 10
14 14
9 9
15 15
9 9
11 11
19 25
12 12


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Signal transduction response regulator, receiver domain
IPR001789
Signal transduction response regulator, receiver domain Domain 92 (381) No
CheY-like superfamily
IPR011006
CheY-like superfamily Domain 93 (386) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR011006 IPR001789


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Species
Information to display
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(click on the button above to get your protein list)