Family GP069664


Family ID GP069664  add to my list RDF
Family name Unannotated cluster   suggest a name
Family Ontology
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N/A
Curation status ?
Found in Tracheophyta
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
MADS transcription factor family (plant-specificity: 60%)
GP000028 (4022)
2
Mgamma-I subfamily
GP015494 (458)
3 GP040184 (420)
4 GP069664 (407)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 407
Species Count (w/o splice) Count (w/ splice)
1 1
2 2
8 8
7 7
7 7
6 6
5 5
3 3
6 6
5 5
6 6
4 4
7 7
1 1
1 1
19 21
100 110
3 3
26 26
16 16
6 6
4 4
6 6
3 3
23 23
18 18
35 35
15 15
11 11
24 24
17 17


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
Transcription factor, MADS-box
IPR002100



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Species
Information to display
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