Family GP069746


Family ID GP069746  add to my list RDF
Family name Unannotated cluster   suggest a name
Curation status ?
Found in Tracheophyta
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Probable WRKY transcription factor superfamily (plant-specificity: 99%)
GP000094 (3517)
2
WRKY transcription factor family
GP015175 (3446)
3 GP040289 (377)
4 GP069746 (374)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 374
Species Count (w/o splice) Count (w/ splice)
1 1
12 12
4 4
20 20
18 18
14 14
9 9
10 11
9 9
7 7
12 12
16 18
10 10
6 6
10 10
8 8
6 6
7 8
6 6
9 9
13 29
6 6
14 19
7 7
12 12
8 10
13 13
12 12
12 12
10 10
12 12
22 24
10 10


Information to display




(click on chart bars above to get species proteins)


Close InterPro family
IPR Annotation Type % Occurence Specificity
Transcription factor, WRKY group Iie
IPR017412
Transcription factor, WRKY group Iie Family 1 (2) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
DNA-binding WRKY
IPR003657
DNA-binding WRKY Domain 93 (349) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR003657


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Species
Information to display
?


(click on the button above to get your protein list)