Family GP070225


Family ID GP070225  add to my list RDF
Family name Unannotated cluster   suggest a name
Family Ontology
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N/A
Curation status ?
Found in No specificity
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
C2C2 transcription factor family (plant-specificity: 85%)
GP000150 (1938)
2 GP015744 (537)
3 GP040470 (410)
4 GP070225 (360)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 360
Species Count (w/o splice) Count (w/ splice)
1 1
4 7
2 2
9 9
5 5
12 12
8 8
9 9
2 2
6 13
5 6
5 5
5 5
7 11
7 8
4 4
10 10
10 10
9 9
13 18
6 6
20 20
15 44
7 7
13 25
8 8
13 13
6 9
9 9
7 7
6 8
6 6
8 9
15 26
9 9


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
Zinc finger, B-box
IPR000315
CCT domain
IPR010402



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Species
Information to display
?


(click on the button above to get your protein list)