Family GP069748


Family ID GP069748  add to my list RDF
Family name Unannotated cluster   suggest a name
Curation status ?
Found in Embryophyta
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
MYB family transcription factor Group3 SHAQKYF (plant-specificity: 30%)
GP000128 (1885)
2 GP015347 (1332)
3 GP040105 (1332)
4 GP069748 (360)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 360
Species Count (w/o splice) Count (w/ splice)
6 10
3 3
6 6
4 4
13 13
13 13
9 9
9 9
9 15
8 14
7 7
10 10
10 15
9 10
7 7
10 10
11 11
7 7
7 10
8 8
11 11
12 23
1 1
12 20
7 7
12 12
8 9
16 16
9 9
8 9
7 7
9 10
20 24
11 11


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
SANT/Myb domain
IPR001005
Myb domain, plants
IPR006447
Myb domain
IPR017930



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Species
Information to display
?


(click on the button above to get your protein list)