Family GP071346


Family ID GP071346  add to my list RDF
Family name Unannotated cluster   suggest a name
Family Ontology
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molecular_function
protein binding
GO:0005515 (1%) - protein binding
Curation status ?
Found in Embryophyta
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
C2C2 transcription factor family (plant-specificity: 85%)
GP000150 (1938)
2 GP015686 (453)
3 GP040612 (333)
4 GP071346 (324)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 324
Species Count (w/o splice) Count (w/ splice)
5 12
3 3
4 4
5 5
16 16
14 14
6 6
4 4
9 12
9 10
9 9
9 9
10 17
8 8
4 4
6 6
6 6
5 5
6 8
5 5
11 11
10 19
4 4
8 13
4 4
9 9
6 10
20 20
6 6
11 12
6 6
8 12
15 27
8 8


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Zinc finger, B-box
IPR000315
Zinc finger, B-box Domain 93 (300) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR000315


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Species
Information to display
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