Family GP070958


Family ID GP070958  add to my list RDF
Family name Unannotated cluster   suggest a name
Curation status ?
Found in No specificity
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Translocase seca family
GP001665 (165)
2 GP016932 (155)
3 GP041571 (155)
4 GP070958 (155)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 155
Species Count (w/o splice) Count (w/ splice)
2 2
6 6
11 11
5 6
3 3
15 15
2 2
2 2
2 2
7 7
2 2
3 3
2 2
2 2
2 2
4 4
2 2
5 5
2 2
3 3
2 2
2 5
2 2
4 4
2 8
3 3
4 7
5 5
2 2
2 2
4 4
8 8
6 6
2 2
2 2
6 8
2 2


Information to display




(click on chart bars above to get species proteins)


Close InterPro family
IPR Annotation Type % Occurence Specificity
Protein translocase subunit SecA
IPR000185
Protein translocase subunit SecA Family 65 (101) Yes
Uncharacterised protein family UPF0149
IPR011978
Uncharacterised protein family UPF0149 Family 1 (1) Yes

Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR000185
SecA preprotein, cross-linking domain
IPR011130
SecA conserved site
IPR020937
SecA Wing/Scaffold
IPR011116
SecA DEAD-like, N-terminal
IPR011115
SecA motor DEAD
IPR014018



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Species
Information to display
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(click on the button above to get your protein list)