Family GP070832


Family ID GP070832  add to my list RDF
Family name Unannotated cluster   suggest a name
Family Ontology
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molecular_function
malate dehydrogenase activity
GO:0016615 (71%) - malate dehydrogenase activity
Curation status ?
Found in No specificity
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Lactate/malate dehydrogenase family (plant-specificity: 9%)
GP000624 (685)
2
Malate dehydrogenase, NAD/NADP subfamily
GP016151 (243)
3 GP041455 (154)
4 GP070832 (154)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 154
Species Count (w/o splice) Count (w/ splice)
2 2
1 1
9 9
1 1
2 2
5 5
4 4
3 3
3 3
6 6
2 2
2 4
2 2
1 1
3 3
4 7
2 2
3 3
2 2
2 2
4 4
3 3
2 2
6 6
4 9
2 2
9 15
3 3
5 5
2 6
14 14
3 3
4 4
3 3
2 4
3 5
2 2


Information to display




(click on chart bars above to get species proteins)


Close InterPro family
IPR Annotation Type % Occurence Specificity
Malate dehydrogenase, NAD-dependent, cytosolic
IPR011274
Malate dehydrogenase, NAD-dependent, cytosolic Family 58 (90) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
NAD(P)-binding domain
IPR016040
NAD(P)-binding domain Domain 92 (141) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR016040
Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
IPR015955
Malate dehydrogenase, type 2
IPR010945
L-lactate/malate dehydrogenase
IPR001557
Malate dehydrogenase, active site
IPR001252
Lactate/malate dehydrogenase, N-terminal
IPR001236
Lactate/malate dehydrogenase, C-terminal
IPR022383 IPR011274



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Species
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