Family GP094944


Family ID GP094944  add to my list RDF
Family name Unannotated cluster   suggest a name
Curation status ?
Found in Spermatophyta plant-specific
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
MYB family transcription factor Group3 SHAQKYF (plant-specificity: 30%)
GP000128 (1885)
2 GP015347 (1332)
3 GP040105 (1332)
4
(plant-specificity: 100%)
GP094944 (124)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 124
Species Count (w/o splice) Count (w/ splice)
20 20
6 6
4 4
12 12
8 8
1 1
3 6
3 3
4 4
10 10
4 4
6 6
6 6
2 2
1 1
1 1
1 1
5 5
1 2
2 2
2 2
1 1
6 6
2 2
7 8
1 1


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Homeodomain-like
IPR009057
Homeodomain-like Domain 95 (118) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR009057
SANT domain
IPR017884



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Species
Information to display
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(click on the button above to get your protein list)