Family GP072518


Family ID GP072518  add to my list RDF
Family name Pix homologue group   suggest a name
Synonym(s) Poc
Cross-reference(s) PMID:
Pix proteins and the evolution of centrioles.
19020665 PMID:
Pix1 and Pix2 are novel WD40 microtubule-associated proteins that colocalize with mitochondria in Xenopus germ plasm and centrosomes in human cells.
18068700
Family Ontology
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molecular_function
protein binding
GO:0005515 (1%) - protein binding
Curation status ?
Found in No specificity
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
WD40 repeat family (plant-specificity: 19%)
GP000023 (6848)
2 GP016639 (967)
3 GP043016 (88)
4
Pix homologue group
GP072518 (88)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 88
Species Count (w/o splice) Count (w/ splice)
1 1
2 2
9 9
1 2
1 1
2 2
1 1
4 4
2 2
1 1
1 1
2 3
1 2
1 1
1 1
6 8
1 3
1 1
1 1
1 1
1 1
1 1
3 3
1 3
1 1
2 8
1 1
2 2
1 4
2 2
3 3
1 1
1 1
2 2
4 7
1 1


Information to display




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Close InterPro family

No IPR family


Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
WD40/YVTN repeat-like-containing domain
IPR015943
WD40-repeat-containing domain
IPR017986
G-protein beta WD-40 repeat
IPR020472
TFIID subunit, WD40-associated region
IPR007582



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Species
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