Family GP073040


Family ID GP073040  add to my list RDF
Family name Unannotated cluster   suggest a name
Family Ontology
Close Hide
molecular_function
protein binding
GO:0005515 (1%) - protein binding
Curation status ?
Found in Tracheophyta
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Signal transduction superfamily (plant-specificity: 60%)
GP000129 (2217)
2
Pseudo-response regulator family
GP015864 (422)
3 GP043528 (81)
4 GP073040 (81)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 81
Species Count (w/o splice) Count (w/ splice)
1 1
1 1
1 1
3 3
3 3
1 1
1 1
1 1
1 1
1 1
1 1
3 5
1 1
2 2
2 2
2 2
3 3
1 1
2 2
5 5
4 8
1 1
1 8
1 1
2 2
1 3
4 4
1 1
4 4
2 2
2 2
5 6
1 1


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
CheY-like superfamily
IPR011006
Signal transduction response regulator, receiver domain
IPR001789
CCT domain
IPR010402



Build your own display:   ?

Species
Information to display
?


(click on the button above to get your protein list)