Family GP094110


Family ID GP094110  add to my list RDF
Family name Unannotated cluster   suggest a name
Curation status ?
Found in No specificity
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Signal transduction superfamily (plant-specificity: 60%)
GP000129 (2217)
2 GP023840 (32)
3 GP049376 (32)
4 GP094110 (15)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 15
Species Count (w/o splice) Count (w/ splice)
1 1
6 6
1 1
1 1
4 4
1 1
1 1


Information to display




(click on chart bars above to get species proteins)


Close InterPro family
IPR Annotation Type % Occurence Specificity
Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB
IPR011879
Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB Family 13 (2) Yes

Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
Winged helix-turn-helix DNA-binding domain
IPR011991
CheY-like superfamily
IPR011006
Signal transduction response regulator, receiver domain
IPR001789
Signal transduction response regulator, C-terminal
IPR001867



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Species
Information to display
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