Family GP000980


Family ID GP000980  add to my list RDF
Family name Glucose-6-phosphate dehydrogenase family   suggest a name
Synonym(s) G6PDH
Family Ontology
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molecular_function
glucose-6-phosphate dehydrogenase activity
GO:0004345 (87%) - glucose-6-phosphate dehydrogenase activity
NADP binding
GO:0050661 (87%) - NADP binding
biological_process
glucose metabolic process
GO:0006006 (87%) - glucose metabolic process
Curation status ?
Found in No specificity
Phylogenetic analyzes Did not pass filtration




Clustering level Family ID (number of sequences)
1
Glucose-6-phosphate dehydrogenase family
GP000980 (336)
2
Glucose-6-phosphate dehydrogenase family
GP015890 (336)
3 GP040539 (334)
4 GP069986 (334)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 336
Species Count (w/o splice) Count (w/ splice)
2 2
2 2
17 17
10 18
7 7
9 9
4 4
7 7
7 7
10 10
8 8
5 9
5 7
5 5
9 9
5 8
5 9
7 7
4 4
5 5
5 5
6 9
4 4
17 17
7 25
4 4
8 32
5 5
8 8
3 8
5 5
15 15
11 11
5 5
5 5
10 19
5 5


Information to display




(click on chart bars above to get species proteins)


Close InterPro family
IPR Annotation Type % Occurence Specificity
Glucose-6-phosphate dehydrogenase
IPR001282
Glucose-6-phosphate dehydrogenase Family 79 (265) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
NAD(P)-binding domain
IPR016040
NAD(P)-binding domain Domain 85 (286) No
Glucose-6-phosphate dehydrogenase, NAD-binding
IPR022674
Glucose-6-phosphate dehydrogenase, NAD-binding Domain 84 (283) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR016040 IPR022674 IPR001282
Glucose-6-phosphate dehydrogenase, C-terminal
IPR022675
Glucose-6-phosphate dehydrogenase, active site
IPR019796



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Species
Information to display
?


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Alignment not available.
[Masking step 1 details] [Masking step 2 details] [Filtration details] [Global HMM file]

Phylogeny tree not available.


Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
336 256 (76%) 189 (56%) [52; 516; 1355] ~463 2254 425