Family GP000944


Family ID GP000944  add to my list RDF
Family name EnguLfment and Cell MOtility family   suggest a name
Synonym(s) ELMO
Cross-reference(s) PMID:
ELMOD2 is an Arl2 GTPase-activating protein that also acts on Arfs.
17452337 PMID:
CED-12/ELMO, a novel member of the CrkII/Dock180/Rac pathway, is required for phagocytosis and cell migration.
11595183
Family Ontology
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biological_process
phagocytosis
GO:0006909 (93%) - phagocytosis
Curation status ?
Found in No specificity
Phylogenetic analyzes Phylogeny done




Clustering level Family ID (number of sequences)
1
EnguLfment and Cell MOtility family (plant-specificity: 9%)
GP000944 (328)
2 GP015854 (325) , GP115707 (3)
3 GP040502 (325) , GP128028 (3)
4 GP069935 (323) , GP144000 (3)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 328
Species Count (w/o splice) Count (w/ splice)
1 1
4 4
8 8
1 5
1 1
11 11
4 4
10 10
8 8
6 6
4 4
7 10
7 8
5 5
7 7
8 20
6 7
4 4
4 4
5 5
8 8
7 10
4 4
17 17
7 29
4 4
7 29
4 4
7 7
4 11
9 9
5 5
6 6
5 5
5 10
11 32
6 6


Information to display




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Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Engulfment/cell motility, ELMO
IPR006816
Engulfment/cell motility, ELMO Domain 93 (305) No

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Clustering
 



Close Representative InterPro domains - Consensus schema
IPR006816


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Species
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[Masking step 1 details] [Masking step 2 details] [Filtration details] [Global HMM file]

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Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
328 225 (69%) 198 (60%) [41; 263; 860] ~253 1699 224




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