Family GP000068


Family ID GP000068  add to my list RDF
Family name Phytocyanin family   suggest a name
Synonym(s) Blue copper protein, Plastocyanin, Plantacyanin
Cross-reference(s) PMID:
Uclacyanins, stellacyanins, and plantacyanins are distinct subfamilies of phytocyanins: plant-specific mononuclear blue copper proteins.
9761472 PMID:
MtENOD16 and 20 are members of a family of phytocyanin-related early nodulins.
9526510
Curation status ?
Found in No specificity
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Phytocyanin family (plant-specificity: 99%)
GP000068 (1822)
2
Blue copper binding family
GP015103 (1284) , GP015459 (1392) ,
(plant-specificity: 100%)
GP018838 (80) , GP114583 (3) , GP117643 (3) , GP118171 (3)
3 GP039902 (1278) , GP040192 (946) , GP043603 (80) , GP126548 (3) , GP127977 (3) , GP128075 (4) , GP130861 (3) , GP131491 (3)
4 GP069511 (866) , GP069850 (427) ,
(plant-specificity: 97%)
GP080074 (343) , GP070918 (223) , GP070497 (180) , GP073117 (80) , GP139234 (5) , GP140808 (4) , GP143908 (3) , GP144759 (3) , GP096813 (3) , GP145782 (3) , GP148011 (3) , GP148012 (3) , GP148759 (3)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 1822
Species Count (w/o splice) Count (w/ splice)
1 1
1 1
2 2
25 35
18 18
72 72
40 40
52 52
53 53
27 27
30 30
60 61
65 66
54 54
65 65
60 66
64 64
31 31
52 52
46 46
34 34
40 43
34 34
44 44
65 70
57 57
78 91
42 42
56 56
48 49
109 109
45 45
77 77
42 42
49 52
84 86
55 55


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Plastocyanin-like
IPR003245
Plastocyanin-like Domain 93 (1691) No
Cupredoxin
IPR008972
Cupredoxin Domain 94 (1710) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR003245 IPR008972


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Species
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