Family GP080700

Family ID GP080700  add to my list RDF
Family name Unannotated cluster   suggest a name
Curation status ?
Found in Oryza sativa
Phylogenetic analyzes Not available

Clustering level Family ID (number of sequences)
(plant-specificity: 100%)
GP000116 (1347)
AUX/IAA transcription factor family
GP015122 (1299)
3 GP054800 (3)
4 GP080700 (3)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.

  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.

Sequence total: 3
Species Count (w/o splice) Count (w/ splice)
1 3

Information to display

(click on chart bars above to get species proteins)

Close InterPro family
IPR Annotation Type % Occurence Specificity
AUX/IAA protein
AUX/IAA protein Family 100 (3) No

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Aux/IAA-ARF-dimerisation Domain 100 (3) No

Close Domain architecture

Close Representative InterPro domains - Consensus schema
IPR011525 IPR003311

Build your own display:   ?

Information to display

(click on the button above to get your protein list)