Gene AT2G37390.1
Sequence ID | AT2G37390.1 add to my list | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Species | Arabidopsis thaliana | ||||||||||||
Alias | Q58FZ0 | ||||||||||||
Length | 259aa | ||||||||||||
PubMed References |
Display PubMed Reference(s) (5)
|
||||||||||||
Gene Ontology |
Display term(s) (1)
|
Length: 259 amino acids
>AT2G37390.1_ARATH MKGRMFCASQASTAICSSMDHVHKSTTTDEDERNSGRAIDRHNPIIKDGRRSFADDFIKL PTSAEDGEMSNKKLEIYKGRRSITGRRSTGGGGGGGAAALLKLITNDIGLARKSFSCVAR PACDLIKTPVGSTRYLLGSDPDSITGSVDQDPAKTVEAEAPAGEDKTLTEKKTTCGDTDQ QVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEILDSISKVKN AQFWTNPTIPKPNVETQNP
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | GP015837 | Unannotated cluster |
3 | GP040905 | Unannotated cluster |
4 | GP070656 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
SODIUM POTASSIUM ROOT DEFECTIVE 2/3
IPR016578
|
SODIUM POTASSIUM ROOT DEFECTIVE 2/3 | Family |
Figure 1: IPR domains for AT2G37390.1
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
MELO3C003095.2.1 | orthology | 1 | 3 | 142 | 2.86e-41 |
brana_pan_p030312 | orthology | 0.238 | 3 | 341 | 6e-119 |
brana_pan_p036701 | orthology | 0.253 | 3 | - | - |
braol_pan_p021666 | orthology | 0.247 | 2 | - | - |
braol_pan_p031578 | orthology | 0.237 | 2 | 356 | 4.98e-125 |
brarr_pan_p002630 | orthology | 0.255 | 3 | - | - |
brarr_pan_p008392 | orthology | 0.248 | 3 | 351 | 5.02e-123 |
cajca.ICPL87119.gnm1.ann1.C.cajan_09762.1 | orthology | 1 | 4 | 176 | 3.4e-44 |
cajca.ICPL87119.gnm1.ann1.C.cajan_37472.1 | orthology | 1 | 5 | - | - |
cicar_pan_p008704 | orthology | 1 | 4 | 158 | 9.29e-48 |
cicar_pan_p017889 | orthology | 1 | 4 | - | - |
cucsa_pan_p020833 | orthology | 1 | 3 | - | - |
medtr_pan_p001385 | orthology | 1 | 4 | 168 | 3.91e-51 |
medtr_pan_p025678 | orthology | 1 | 4 | - | - |
phavu.G19833.gnm2.ann1.Phvul.001G171400.1 | orthology | 1 | 5 | 175.3 | 5.2e-44 |
phavu.G19833.gnm2.ann1.Phvul.L001741.1 | orthology | 1 | 5 | - | - |
soybn_pan_p015281 | orthology | 1 | 5 | - | - |
soybn_pan_p025035 | orthology | 1 | 5 | - | - |
soybn_pan_p025142 | orthology | 0.991 | 4 | 181 | 4.11e-56 |