Gene Bv8_190260_chqz.t1


Sequence ID Bv8_190260_chqz.t1  add to my list
Species Beta vulgaris
Alias No gene alias
Length 157aa
Gene Annotation cDNAEvidence=100
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 157 amino acids

>Bv8_190260_chqz.t1_BETVU
MCRSPASTAVACMPDGMRSVVVPGKAHGRAMVVNQKGGIGRNSIKYSRLVESDDRLLKGN
LKGDQGLPVSHNLLKKQRSLQLSSSDSTDMFQVVVLRVSLHCQACAGKVKKHLSRMEGVT
SFSIDLDTKKVTIRGQVSPTVVLESVSKIKKAEFWTC




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP015837 Unannotated cluster
3 GP040905 Unannotated cluster
4 GP070656 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for Bv8_190260_chqz.t1



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
PGSC0003DMP400022303 orthology 0.784 3 115.5 3.1e-26
Solyc01g105000.2.1 orthology 0.799 2 116.7 1.4e-26
capan_pan_p019823 orthology 0.83 3 116 1.2e-33
capan_pan_p036114 orthology 0.955 3 - -
capan_pan_p041384 orthology 0.946 3 - -
evm_27.model.AmTr_v1.0_scaffold00010.206 orthology 0.837 2 124 6.2e-29