Gene Ca_31_336.3
Sequence ID | Ca_31_336.3 add to my list | ||
---|---|---|---|
Species | Coffea arabica | ||
Alias | No gene alias | ||
Length | 358aa | ||
Gene Ontology |
Display term(s) (1)
|
Length: 358 amino acids
>Ca_31_336.3_COFAR MSWQLKKNYKIPKNQPNTIRYGVDGIDIDIKQHKVTVTGDVDANTLLRKLIKSGKHAELW PEKAEPKEKKTSSKSKEKEKLTEQETSNQEPSQGSVNNIKTASVKEVKPPPVKAEAVAQE PTKNSKGGGAKDANDGGEAKSGEENGGGGAAKVTASSEGGAKKRESGGDQAVEELKTEEK KPESGGTGGAHPPPEEKKGGESVKNSPVVENVSGGGGNDGNGKKKKKKGQNGNLTGGEQS SAAQEAMRPGNHDDGPPAVSASDHHSHPHHRSFDQYAPQFYGPPGPPPIYAVSYNTANPA SSYTASFYAPPQPNSYVYSYSGGPELQAPPSDFDANPRQPLDSFEIFSDENPNGCSIM
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | GP023608 | Unannotated cluster |
3 | GP040483 | Unannotated cluster |
4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for Ca_31_336.3
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
AT1G56210.1 | orthology | 1 | 4 | - | - |
Ca_18_40.10 | ultra-paralogy | 0.0498 | 0 | - | - |
Cc02_g33120 | orthology | 0.0395 | 1 | - | - |
brana_pan_p003618 | orthology | 1 | 5 | - | - |
brana_pan_p018109 | orthology | 1 | 5 | - | - |
braol_pan_p013743 | orthology | 1 | 5 | - | - |
brarr_pan_p006678 | orthology | 1 | 5 | - | - |
maize_pan_p033245 | orthology | 1 | 2 | - | - |