Gene Ca_452_22.1


Sequence ID Ca_452_22.1  add to my list
Species Coffea arabica
Alias No gene alias
Length 353aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 353 amino acids

>Ca_452_22.1_COFAR
MGEKDEKKNEGEKKVTEAKNQGEKKTADGGGKKDDAQSPIVLKLDLHCEGCAKKVKRSIK
HFDGVEDVKADCASNKLTVTGNVDPGWLREKVEQRTKKKVELLSPPSKKDSGGGGDKKAD
DKADKKSDDKKKDEPKKPKEPQVSTVVLKIRLHCDGCAHKIKRIIKKIDGVEAVVVDNEK
DLVTVKGTMDAKDLTPYLKDKLKRTVDVVPPKKEAGGGDKKEKEAGGGDKKEKEKQKESS
GEKGAAESKGGGGGDKGKSIEEPKVGVHKLEYHGASTSTPHTYYYYGMPVYNQSYANQDY
GVSVPTMYGQGGYGTTGYVVDYRPHEPPPPPPVYLPAHDQMFSDENPNACSVM




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP071484 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for Ca_452_22.1



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Ca_7_292.1 ultra-paralogy 0.0011 0 - -
Cc06_g04230 orthology 0.0136 1 450.3 1e-126
DCAR_014996 orthology 0.635 5 191.4 1.1e-48
DCAR_017683 orthology 0.62 5 - -
HanXRQChr01g0027741 orthology 0.763 5 - -
HanXRQChr13g0401031 orthology 0.826 5 - -
HanXRQChr14g0454431 orthology 0.702 5 204.5 1.7e-52
HanXRQChr17g0570331 orthology 0.689 5 - -
Oeu005022.1 orthology 0.596 2 - -
Oeu016984.1 orthology 0.569 2 192.6 6.6e-49
Oeu019283.1 orthology 0.531 2 - -
Oeu045227.1 orthology 0.661 2 - -
Oeu061953.1 orthology 0.595 2 - -
PGSC0003DMP400006915 orthology 0.509 6 267 3.16e-87
Solyc09g008200.2.1 orthology 0.548 6 263 9.04e-86
Solyc10g086280.1.1 orthology 0.69 5 - -
capan_pan_p000093 orthology 0.816 5 - -
capan_pan_p021581 orthology 0.57 5 179 4.6e-54
ipotf_pan_p002813 orthology 0.662 5 266 1.8e-87
ipotf_pan_p014346 orthology 0.59 5 - -
itb06g04100.t1 orthology 0.582 5 187.2 2.1e-47
itb15g00310.t1 orthology 0.666 5 - -