Gene Ca_63_138.6


Sequence ID Ca_63_138.6  add to my list
Species Coffea arabica
Alias No gene alias
Length 279aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 279 amino acids

>Ca_63_138.6_COFAR
MAYSLPLVAPSNFVLKLKIHCSKCENKLKRMLLRVAGVHSVSIDAKQGTVAISGNVEPST
ILMLLEKGVGRKAELLWEQSPSASSTSSKLDGQNLEIIAESKVVDELFNDPNVVAQLERL
SGIQGLTNIQVTYSKTIKLSFKGEKDDLSDKNVQVTARDQRSGIFCEASASCCGGHNHGG
VNRNVHGYGIGGCCGNHAAGYPIASYVCPVHSCDGNSYWPPHACGSVPPPAPQPPCPGCS
PSAPPLGTTYDTPPPPTSMGYSYFSPFSDDNLSSGCNII




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP481479 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for Ca_63_138.6



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Ca_25_98.1 orthology 0 1 - -
PGSC0003DMP400024192 orthology 0.993 4 - -
PGSC0003DMP400040733 orthology 0.916 3 - -
capan_pan_p030739 orthology 0.987 4 - -
capan_pan_p038035 orthology 0.995 4 - -
capan_pan_p041830 orthology 0.992 4 - -
ipotf_pan_p023915 orthology 0.894 4 - -
ipotf_pan_p024814 orthology 0.885 3 - -
itb02g05420.t1 orthology 0.907 4 - -