Gene Ca_74_171.1


Sequence ID Ca_74_171.1  add to my list
Species Coffea arabica
Alias No gene alias
Length 416aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 416 amino acids

>Ca_74_171.1_COFAR
MSKDEDFKLLKIQTCALRVNIHCDGCKQKVKKLLQRIEGVYQVSIDAEQQKVTVSGGVDS
ATLIKKLVRAGKHAELWSQTTNQNQKQQKANCNKDDKNNNKGQKQQQGLIKGLEALKNQQ
KFAFNLEEDEDFLDEEEDEDEEEEELRFLREKANQINLLRQQTAAMQVKNAKNGFGQAMA
AAAAASSNGKMPNNSGHVNAGKKANHQPNQNMGMKGNPGGIDQKTMQALKMNNAQFAGGG
NIINPGEAKMGNDISSMMNLAGFHGEGGANNFASVLGGNAASTGSGAVYHHQVQPNNQAF
MNSSPAGFPTAGMAAGHHPSAMMVNMNGNGVYNQPSSQSMLMNLQNRHAMQQPQMMYNRS
PYIPTSTGYYYGYGPAAVLPPYHSYMGSDPSYYNTADQSASAHMFSDENTSSCSIM




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for Ca_74_171.1



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
DCAR_007286 orthology 0.588 2 - -
DCAR_030213 orthology 0.552 2 235.3 7.6e-62
PGSC0003DMP400053180 orthology 0.563 5 144.1 2.2e-34
Solyc05g008300.1.1 orthology 0.552 5 - -
capan_pan_p003259 orthology 0.504 4 241 1.61e-75
ipotf_pan_p020764 orthology 0.601 4 267 6.5e-86
itb14g01030.t1 orthology 0.61 4 241.5 1.1e-63