Gene Cc02_g26130


Sequence ID Cc02_g26130  add to my list
Species Coffea canephora
Alias No gene alias
Length 236aa
Gene Annotation Heavy metal transport/detoxification superfamily protein
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 236 amino acids

>Cc02_g26130_COFCA
MSKEEKKEKEKVKVKEKEIEVITAVYKINLHCPKCAHDIRRPLLRIPGVHSADIKHEKNE
VTIKGAIVAKKMHERLQKWSKKKVELISETKVKEAEKGAKETKKTILIKSYMHCAECERE
IRKRLLKHKGIHNVKTDIKAQTISIEGVIESEKLLTYMRKKVHKYAEIIPPKAKEKEKEK
KDEKKEKEKIEVKIVEFKEVEKVAAKTKEGDTPYFVHYVYAPQLFSDENPNACSIM




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP342504 Unannotated cluster
4 GP464372 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for Cc02_g26130



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Ca_64_447.2 orthology 0.0011 1 348.2 1.1e-95
DCAR_029550 orthology 0.517 4 252.3 3.4e-67
HanXRQChr06g0168381 orthology 0.596 5 195.7 5.4e-50
Oeu036922.1 orthology 0.28 2 - -
PGSC0003DMP400011529 orthology 0.507 6 218.8 3.9e-57
Solyc10g039390.1.1 orthology 0.56 6 232.3 3.4e-61
capan_pan_p023451 orthology 0.534 5 153 1.08e-47
ipotf_pan_p011107 orthology 0.466 5 231 8.81e-77
itb09g19040.t1 orthology 0.489 5 145.2 6e-35