Gene Cm050050.1
Sequence ID | Cm050050.1 add to my list | ||
---|---|---|---|
Species | Citrus medica | ||
Alias | No gene alias | ||
Length | 146aa | ||
Gene Ontology |
Display term(s) (1)
|
Length: 146 amino acids
>Cm050050.1_CITME MGALDYLSNFCTVTSTRSKRKAMQTVEIKVKMDCDGCERRVKNAVNSMKGVKSVEVNRKQ SRVTVSGYVEPNKVLKRVKSTGKRAEFWPYIPQHLVHYPYAPGAYDKRAPAGYVRNVVQA FPATNAPEDNLVSIFSDDNVNACSIM
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | Heavy metal transport/detoxification group1
GP015397 |
Heavy metal transport/detoxification group1 |
3 | GP040065 | Unannotated cluster |
4 | GP463678 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for Cm050050.1
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
Cg6g018770.1 | orthology | 0 | 1 | 297 | 6.3e-81 |
Cs6g17860.1 | orthology | 0 | 1 | 297 | 6.9e-81 |
Manes.01G115000.1 | orthology | 0.156 | 3 | - | - |
Manes.02G074200.1 | orthology | 0.139 | 3 | 271.2 | 4.4e-73 |
maldo_pan_p022588 | orthology | 0.106 | 2 | 259 | 1.33e-90 |
thecc_pan_p003496 | orthology | 0.114 | 4 | 266 | 2.53e-93 |