Gene Cm053230.1
| Sequence ID | Cm053230.1 add to my list | ||
|---|---|---|---|
| Species | Citrus medica | ||
| Alias | No gene alias | ||
| Length | 402aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 402 amino acids
>Cm053230.1_CITME MTKEEDFKLLKIQTCVLKVNIHCDGCKQKVKKLLQRIEGVYQVNIDAEQQKVTVSGSVDS ATLIKKLVRAGKHAELWSQKSNQNQNQKNNCIKDDKNNNKGQKQGLMKGFEPLKNQQKFP TFISEDDDDYFDDDEEDYEDELSFLKANQLGQLGLLRPQAMDANNAKKAVGAMTAAAASN SNNKMNNNVGNGNAGKKGNPNQNVGMKVINPNGIDQKTMEALKMNNVLNGGNINAGGGGG GGGDVKRGNDINAMMNLAGFHGNGANIPTAATALGGSANGLNGFQAVQPNNGFQNSTAAA GFPNGTGQYPPSAMLMNMNGMNHPSQMMMNMNMNMQNRHAMQQPQMRYHRSPFVPPNTGY YYSHSPAPHFYPEQPNYSGDHSVAAATTHMFSDENTSSCSIM
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP023608 | Unannotated cluster |
| 3 | GP040483 | Unannotated cluster |
| 4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for Cm053230.1
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Cg2g033940.2 | orthology | 0.0241 | 2 | 458.4 | 4.5e-129 |
| FvH4_4g32260.1 | orthology | 0.39 | 5 | 258.5 | 7.1e-69 |
| Manes.15G126600.1 | orthology | 0.289 | 4 | 282.3 | 5.3e-76 |
| Manes.17G075400.1 | orthology | 0.277 | 4 | - | - |
| cajca.ICPL87119.gnm1.ann1.C.cajan_07848.1 | orthology | 0.392 | 7 | 280.4 | 2e-75 |
| cicar_pan_p014991 | orthology | 0.398 | 7 | 281 | 9.63e-92 |
| maldo_pan_p009716 | orthology | 0.326 | 5 | 303 | 4.64e-100 |
| maldo_pan_p033106 | orthology | 0.358 | 5 | - | - |
| medtr_pan_p032193 | orthology | 0.406 | 7 | 360 | 5.3e-123 |
| orange1.1t04788.1 | orthology | 0.0218 | 1 | 465.3 | 4e-131 |
| phavu.G19833.gnm2.ann1.Phvul.007G038000.1 | orthology | 0.401 | 8 | 229.9 | 2.8e-60 |
| soybn_pan_p012384 | orthology | 0.37 | 8 | 342 | 4.7e-115 |
| soybn_pan_p023139 | orthology | 0.364 | 8 | - | - |
| thecc_pan_p016247 | orthology | 0.264 | 4 | 412 | 4.01e-143 |
| vitvi_pan_p018179 | orthology | 0.268 | 5 | 441 | 1.81e-154 |
| vitvi_pan_p040075 | orthology | 0.308 | 5 | - | - |