Gene Cm060230.1


Sequence ID Cm060230.1  add to my list
Species Citrus medica
Alias No gene alias
Length 318aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 318 amino acids

>Cm060230.1_CITME
MGEQNEGDKKAAGAAADAGGKKDDGVVTVVLKVDLHCEGCAKKIKRAMKNYEGVVDVKTD
CGANKVTVTGKVEPAKLKERLEAKTKKKVDLVSPQPKKDAGGGEKKSEEKSEKKPDDKKS
EEKKPPKESTVVLKIRLHCEGCISKIKKIIYKTKGVDNVTIDGGKDVVTVKGTMDVKELV
PYLKEKLKRNVEVVPAKKDDGEKKENKDADKGGDKKAKEAAPAADKGGEKKEKEASAAGG
GDGGKVEVHKMEYYGYPYPPAPSYWYDNHVYGQSYPMENQHQVVYVNQGYPPQMHHTPPM
YHAPQMFSDENPNACSVM




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP071484 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for Cm060230.1



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
CgUng002500.1 orthology 0.0141 3 445.7 2.4e-125
CgUng019980.1 orthology 0.0141 3 - -
FvH4_6g16410.1 orthology 0.569 5 196.1 3.4e-50
MELO3C024466.2.1 orthology 0.538 5 196 3.21e-60
Manes.08G010600.1 orthology 0.38 2 213.8 1.8e-55
Manes.09G066300.1 orthology 0.407 2 - -
cucsa_pan_p001888 orthology 0.549 5 - -
maldo_pan_p018618 orthology 0.535 5 241 1.03e-77
maldo_pan_p021518 orthology 0.549 5 - -
orange1.1t00956.1 orthology 0.0169 2 438 5.4e-123