Gene Cm212920.1


Sequence ID Cm212920.1  add to my list
Species Citrus medica
Alias No gene alias
Length 110aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 110 amino acids

>Cm212920.1_CITME
MVAVSKQSLLYFEDLTPPSFQVIVVTANMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRV
TVKADFGLNKNVKDDPTRSRVKISGCYQFFISVSGLFASAAFLRIKQKSA




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP022701 Unannotated cluster
3 GP047979 Unannotated cluster
4 GP472665 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for Cm212920.1



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AT2G35730.1 orthology 1 5 70.1 9.9e-13
Manes.02G038800.1 orthology 1 1 97.4 6.6e-21
brana_pan_p001635 orthology 1 6 77.4 1.57e-19
brana_pan_p054319 orthology 1 6 - -
braol_pan_p040844 orthology 1 6 77.4 1.42e-19
braol_pan_p052965 orthology 1 6 - -
brarr_pan_p008654 orthology 1 5 79.3 3.71e-20
cajca.ICPL87119.gnm1.ann1.C.cajan_01523.1 orthology 1 6 91.7 3.6e-19
cicar_pan_p024775 orthology 1 5 84 1.85e-22
cucsa_pan_p023048 orthology 1 3 - -
maize_pan_p044279 orthology 1 4 - -
medtr_pan_p004416 orthology 1 5 75.9 3.88e-19
phavu.G19833.gnm2.ann1.Phvul.003G219900.1 orthology 1 6 82.4 2e-16
soybn_pan_p039239 orthology 1 5 - -
soybn_pan_p043513 orthology 1 5 - -
soybn_pan_p045249 orthology 1 5 93.6 5.48e-26