Gene DCAR_009262


Sequence ID DCAR_009262  add to my list
Species Daucus carota
Alias No gene alias
Length 859aa
Gene Ontology
Open Display term(s) (2)
biological_process
metal ion transport
GO:0030001 - metal ion transport
recognition of pollen
GO:0048544 - recognition of pollen



Length: 859 amino acids

>DCAR_009262_DAUCA
MILGIAEEGLAMALSSTCPSSTTFLGGRAIDRCNPIIRDARRLGKVVQMNTTDTEPPSPP
PQPATDQNFVNSMNDIIHQTEKKKKKKKAHMISSLKKEKKTNSSADCAGKMVNKTGSTSK
VATDDYEIIVDSPGDSSRYLLTTTNSSSTREMKSFVYSQRFDPRLAMVEQSSATSSFSSP
VTSSPASAAPNHQVVVLRVSLHCRGCERKMRKHISKMEGVTSFNIDFAAKKLTVAGEVTP
LSVLASVSKVKKAQLLTSPAPTTSSSTIPSYSDQTISPISQDKVTEHGPVVGLIWTNPGQ
MLELSYPLVDAKMSSINSTHPLRNGDTIVSARGEFEMGFFSTPGLPQNRYFGIWYKKISS
NTVVWVANRDSPVTNTSGVVSVTSQGILVLNGTKMIWSSNSSRSVSNPIAQLLDTGNLVF
RDGNNIIWQSFDHPVDNFLPGMKFGIDLDSGLQRYFTSWKSVDDPSTGKFTYRTDRGGYP
QSLLWEGSKVTYRTGPWVGSGYSGFPKQDSTELYRIEYVISPREIYYKFDLNDNSESAIT
RLVLTPNGDTQRLIWNKQTHVWSVYLSYRVNDCDDYEFCGGNGICNINSSPRCECMKGFH
PKFQENWDTADWSGGCARNTQLDCKKGDGFIRVSGVKLPDTRLSWYNTTLTLQDCRKLCL
SNCNCTAYSNTDFRGGGSGCLLWFGDLADMRGYSDDGQVLYVRMAASDSDSTEESKKSST
SRVVVIVIPLLAAVTVILVLLLLYAFRKRKLKRKGIMPAWRKYNEGKHLDVVDPAIMESS
NHYELFRVIQIALLCVQQYPEDRPSMSSVVLMLSSKIELTIPKEPGFYSERNPEQNHSSS
SKCDSESVNEISITRLTPR




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP015837 Unannotated cluster
3 GP040905 Unannotated cluster
4 GP540598 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily
S-receptor-like serine/threonine-protein kinase
IPR024171 		S-receptor-like serine/threonine-protein kinase Family
Bulb-type lectin domain
IPR001480 		Bulb-type lectin domain Domain
S-locus glycoprotein domain
IPR000858 		S-locus glycoprotein domain Domain
Bulb-type lectin domain superfamily
IPR036426 		Bulb-type lectin domain superfamily Homologous_superfamily
PAN/Apple domain
IPR003609 		PAN/Apple domain Domain
S-locus receptor kinase, C-terminal
IPR021820 		S-locus receptor kinase, C-terminal Domain
EGF-like domain
IPR000742 		EGF-like domain Domain

IPR006121 IPR036163 IPR024171 IPR001480 IPR000858 IPR036426 IPR003609 IPR021820 IPR000742
Figure 1: IPR domains for DCAR_009262



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
DCAR_017761 ultra-paralogy 0.827 0 - -
HanXRQChr01g0026521 orthology 1 1 - -