Gene DCAR_020219
| Sequence ID | DCAR_020219 add to my list |
|---|---|
| Species | Daucus carota |
| Alias | No gene alias |
| Length | 320aa |
Length: 320 amino acids
>DCAR_020219_DAUCA MVVHKGRKASVKEAVKNDVVEDLDVEVSDQDEESEDDVEVSDQDEESEDDAEESGEDDGD VKLSVPQEKAVYDRAGLLDKLGNVSWPENVDWIHKLTLDYSQEKEVDVNDDLNRELSFYT QALDSTREAFMKLESMNIPFLRPTDYYAEMVKSDHHMEKVRGRLLAEKRRIEEAEERRKA RENKKMSKAVQAQKQKERAKEKKNEIESVKKWRKQRQQSGFPGNGKAFDIGLSFEDGNTF ERSNKKRPGVHPGDRSGGKARQGAGRGKPGADKKRKGREFKESKYGFGGRKGMKKQNTAE TTNDMRDFSKGFSKNKKQKT
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Unknown function duf1138 family
GP002478 |
Unknown function duf1138 family |
| 2 | GP018276 | Unannotated cluster |
| 3 | GP042981 | Unannotated cluster |
| 4 | GP075980 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Eukaryotic rRNA processing
IPR008610
|
Eukaryotic rRNA processing | Family |
Figure 1: IPR domains for DCAR_020219
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| AUR62000393-RA | orthology | 0.702 | 3 | - | - |
| AUR62006749-RA | orthology | 0.715 | 3 | 135.6 | 9.4e-32 |
| Bv4_080540_miyg.t1 | orthology | 0.701 | 3 | 221.9 | 5.5e-58 |
| DCAR_018123 | ultra-paralogy | 0.682 | 0 | - | - |
| DCAR_020483 | ultra-paralogy | 1 | 0 | - | - |
| HanXRQChr05g0141401 | orthology | 0.548 | 2 | 124.8 | 1.6e-28 |
| HanXRQChr08g0224051 | orthology | 0.573 | 2 | - | - |