Gene FvH4_5g08650.1


Sequence ID FvH4_5g08650.1  add to my list
Species Fragaria vesca
Alias No gene alias
Length 348aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 348 amino acids

>FvH4_5g08650.1_FRAVE
MGEKEKKPEEKKMEEKKPEEVKKPEEEKKAEENKKEEKPAEEKKEEKKAEEGKDGKEAKE
GDAPPPPPPPQEIVLRVYMHCEGCARKVKRCLKGFQGVEDVSTDCKSHKVVVKGEKADPI
KVLERVQRKSHRQVELLSPIPKPPAEEEKKPEEKPKPEEKKEEPPQVISVVLKVHMHCEA
CAQEIKKRIQRMKGVESAEPDLKGSQVTVKGVFDPAKLVEYVYKRTGKQAEIVKQEPEKK
ADKEEAKEGSKDGKKGGEEGGKDKKSGDGGGEAAPPAEDNKEKKGDGNEGGAAASVAPEG
GAVTEETKVGELMKINEYNYYPPRYAMELYAYPPQIFSDENPNACAVM




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP070448 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for FvH4_5g08650.1



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Cg7g010440.1 orthology 0.371 6 221.9 6.1e-58
Cm018610.1 orthology 0.373 6 221.9 1e-57
Manes.06G121400.1 orthology 0.294 4 259.6 3.2e-69
Manes.14G049200.1 orthology 0.308 4 294 2.35e-98
maldo_pan_p003643 orthology 0.159 1 - -
maldo_pan_p029843 orthology 0.16 1 303 9.88e-102
orange1.1t02606.2 orthology 0.378 5 224.9 7.9e-59
thecc_pan_p013659 orthology 0.306 3 284 3.4e-94
vitvi_pan_p029254 orthology 0.337 3 302 1.39e-101