Gene FvH4_6g05480.1


Sequence ID FvH4_6g05480.1  add to my list
Species Fragaria vesca
Alias No gene alias
Length 606aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 606 amino acids

>FvH4_6g05480.1_FRAVE
MNKQEFMKIQSCVLRVNIHCEGCKQKVKKLVQKIEGVYTTSIDAEQGKVTVTGNVDPATI
IKKLEKNGKHAELWGGGGGGGGQKGNSNQAQQFNPNQFKNMSMGNHGKGGKDNGNSKAQK
GGGGGGGKDQQKGINVQQQIQQQQIQQQQQMMKGAKVMMPMKEQNKSVKFNLPAEEEFSD
GEFDDEFDDEDYDDDEFDDEDYDDDEEEEELNHGHQVHPNKVMMMPGMGANGQQGPYGKM
VMPVMGNNGHGPHGPGGMVNMNAMGGKKLGGGGGGGGGGSAKKGEVIDFPVQGMKGMGGN
KEKEGKDGKGGKKKGKGGGDDEKSKSKKKSKGGKDGKGGKEGKDKSEGKKGGLLGWLSRS
TSKKESDGNSKGGKGSKKGGDMFDDFDEIEIMNYKKGGKGGKEGKESKESKEGKGSKGGK
GGGGNGGDVHQMGQKGHMGQAGQMGHMGQMGQMGNMGQMGQMRPMGQMGQMGRGGESMGQ
MGNYPMGNMGQMGNVPAVQGLPAPGMMSRGGGGGGAGYYQGMGNAGNPYTQQQQQQLQHQ
QYMAMMMNQQQQPQMASGNDMYQSMLYARPQPHMNYMPHQPMPSAGPTEPYTNYFSDENA
NSCTIM




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily
Armadillo-type fold
IPR016024 		Armadillo-type fold Homologous_superfamily

IPR006121 IPR036163 IPR016024
Figure 1: IPR domains for FvH4_6g05480.1



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Cg2g030800.1 orthology 0.687 7 - -
Cm135850.2 orthology 0.682 6 - -
Cs3g13440.2 orthology 0.687 7 - -
Manes.08G122800.1 orthology 0.668 4 - -
Manes.09G164500.1 orthology 0.629 4 - -
maldo_pan_p000798 orthology 0.477 2 175 2.23e-47
maldo_pan_p029348 orthology 0.474 2 - -
sorbi_pan_p007985 orthology 1 1 - -
thecc_pan_p017754 orthology 0.596 5 - -