Gene ORGLA03G0040300.1
Sequence ID | ORGLA03G0040300.1 add to my list | ||
---|---|---|---|
Species | Oryza glaberrima | ||
Alias | No gene alias | ||
Length | 155aa | ||
Gene Ontology |
Display term(s) (1)
|
Length: 155 amino acids
>ORGLA03G0040300.1_ORYGL MGVDDIIAELRVLPAKILPKKKPKQFQKVEVKVRMDCEGCERKVRKAVEEMKGVSSVEVD AKQNKVTVTGYVEQEEVVGRLRRRAGKKAEPWPYVPYDVVPHPYAPGAYDKKAPPGYVRN ALADPDAAPLARATEEEEKLASAFSDENPNSCAVM
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | Heavy metal transport/detoxification group1
GP015397 |
Heavy metal transport/detoxification group1 |
3 | GP040065 | Unannotated cluster |
4 | GP463617 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for ORGLA03G0040300.1
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
XP_008807137.1 | orthology | 0.556 | 3 | - | - |
XP_008809430.1 | orthology | 0.505 | 3 | - | - |
XP_010920102.1 | orthology | 0.517 | 4 | - | - |
XP_010933357.1 | orthology | 0.507 | 4 | - | - |
cocnu_pan_p018212 | orthology | 0.503 | 4 | - | - |
cocnu_pan_p019869 | orthology | 0.485 | 4 | - | - |
cocnu_pan_p033502 | orthology | 0.515 | 4 | - | - |
orysa_pan_p027349 | orthology | 0 | 1 | 306 | 1.16e-108 |